解决办法:

修改:Makefile.config
INCLUDE_DIRS
/usr/include/hdf5/serial/
修改:Makefile
LIBRARIES
hdf5_hl and hdf5 改为 hdf5_serial_hl ,hdf5_serial

其他make all之前的报错信息见:https://blog.csdn.net/forest_world/article/details/51371560